BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024D04SP1|AL428205
(1025 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1042 1704 0.0
>3x_Contig1042
Length = 3616
Score = 1704 bits (859), Expect = 0.0
Identities = 905/915 (98%), Gaps = 4/915 (0%)
Strand = Plus / Plus
Query: 1 atatcaaaataacgggaaaggtatggtgagcaattatgctaagcttttatccgatcaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1263 atatcaaaataacgggaaaggtatggtgagcaattatgctaagcttttatccgatcaagg 1322
Query: 61 attttctggtctttatagaggtgtcttaccagtttccatgagacaagctgcaaatcaagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1323 attttctggtctttatagaggtgtcttaccagtttccatgagacaagctgcaaatcaagc 1382
Query: 121 cgttagattgggttgttataacaagatcaagactttggtgcaagattacacaaacgtacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1383 cgttagattgggttgttataacaagatcaagactttggtgcaagattacacaaacgtacc 1442
Query: 181 taaggataaacctttgagttcaggtttgaccttcattgtaggtgccttcagtggtatcgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1443 taaggataaacctttgagttcaggtttgaccttcattgtaggtgccttcagtggtatcgt 1502
Query: 241 taccgtttatacgacaatgcctatcgataccgttaagacaagaatgcaatctttgaatgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1503 taccgtttatacgacaatgcctatcgataccgttaagacaagaatgcaatctttgaatgc 1562
Query: 301 aggccaatattcttctactattaactgtttcgctaccattttcaaggaggaaggtttgaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1563 aggccaatattcttctactattaactgtttcgctaccattttcaaggaggaaggtttgaa 1622
Query: 361 gactttctggaaaggtgctactccaagattgggtagattgatcctttctggtggtattgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1623 gactttctggaaaggtgctactccaagattgggtagattgatcctttctggtggtattgt 1682
Query: 421 cttcaccatctatgagaaggtattgacggttttggcataattagcctttcagctttctta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1683 cttcaccatctatgagaaggtattgacggttttggcataattagcctttcagctttctta 1742
Query: 481 gtgtgtaacaaacgtgtagtttacttataaaacaaaaaatactaaacgataatcttaatc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1743 gtgtgtaacaaacgtgtagtttacttataaaacaaaaaatactaaacgataatcttaatc 1802
Query: 541 cgcatcataaagatgatcggccatttgatgagaatcttttccatctatattgttatgata 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1803 cgcatcataaagatgatcggccatttgatgagaatcttttccatctatattgttatgata 1862
Query: 601 tacaaaaaaatataatacacatgtttgcatatatccacatgagagacatcaaacatgccg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1863 tacaaaaaaatataatacacatgtttgcatatatccacatgagagacatcaaacatgccg 1922
Query: 661 aatagcatcaggtaaaaggaaccattgtatcatgaaatagattaaaagagtaatttggtc 720
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1923 aatagcatcaggtaaaaggaaccattgtatcatgaaatagattaacagagtaatttggtc 1982
Query: 721 atagggtgcactgaattaagagaagacaaaaatttcctttttgttagtttctgaagagg- 779
|||||||| ||||||||||||||||||||||||||||||||||||| |||||| |||||
Sbjct: 1983 atagggtgtactgaattaagagaagacaaaaatttcctttttgttattttctgtagaggt 2042
Query: 780 aacaatcatagagacagcctg-tttgttttattatagtgtatttttttttaattttggat 838
|||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 2043 tacaatcatagtgacagcctgatttgttttattatagtgtatttttttttaattttggat 2102
Query: 839 ccacaacaacttaatggataggattacagtttgatttattctgatgggat-gaaccattt 897
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 2103 ccacaacaacttaatggataggattacagtttgatttattctgatgggatagaaccattt 2162
Query: 898 att-tatgagtgtag 911
||| |||||||||||
Sbjct: 2163 attatatgagtgtag 2177
Score = 173 bits (87), Expect = 8e-43
Identities = 88/89 (98%)
Strand = Plus / Plus
Query: 937 cctgcaaagggtgtctttaagctgcaaaatagaatagtgaataaaaatgtgaatagggca 996
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2210 cctgcaaagggtgtctttaagctgcaaaatagaatagtgaataaaaatgtgaatagggca 2269
Query: 997 aaaaacgaattgaatatatgagaaarggt 1025
||||||||||||||||||||||||| |||
Sbjct: 2270 aaaaacgaattgaatatatgagaaaaggt 2298
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9332
Number of Sequences: 1807
Number of extensions: 9332
Number of successful extensions: 98
Number of sequences better than 1.0e-20: 1
length of query: 1025
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1009
effective length of database: 10,329,639
effective search space: 10422605751
effective search space used: 10422605751
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 51 (101.7 bits)